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BioDOM API

BioDOM is a JAVA library for converting native non-XML output from various bioinformatic tools to XML formats that can be validated against XMLSchemas. BioDOM is available as a download, a web console, or a SOAP API.

The API consists of four services (AlignmentML, SequenceML, RNAStructML and RNAStructAlignmentML) for converting native formats in xml and back.

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BioDOM: Highlights

Summary
Bioinformatics data XML converter
Category
Science
Tags
Protocols
SOAP
Data Formats
XML
API home
http://bibiserv.techfak.uni-bielefeld.de/biod ... 

BioDOM: Specifications

Functionality

Client Install Required
Yes  
Service Endpoint
http://bibiwsserv.techfak.uni-bielefeld.de/bi ...
WSDL
http://bibiwsserv.techfak.uni-bielefeld.de/bi ...

Signup and Licensing

Signup Requirements
None  
Developer Key Required
No  
Account Required
No  
Commercial Licensing
Yes; free, but can be used in commercial projects  
Provider
bibiserv.techfak.uni-bielefeld.de/  
Managed By
Bielefeld Bioinformatics Server (BiBiServ)  
Non-Commercial Lic.
Yes  
Data Licensing
Unspecified  
Usage Fees
None  
Program Fees
 
Certification Program
 
Usage Limits
None given 
Terms of Service
bibiserv.techfak.uni-bielefeld.de/bibi/Administrat... 

Security

Authentication Model
None 
SSL Support
 
Read-only Without Login
 

Support

Vendor API Kits
 
Community API Kits
 
API Blog
 
Site Blog
 
API Forum
 
Developer Support
bibiserv.techfak.uni-bielefeld.de/biodomws/manual.... 
Console URL
bibiserv.techfak.uni-bielefeld.de/biodomws/submiss... 

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