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SoapLab API

Note: The SoapLab API is no longer available.
This profile is retained for historical purposes only.

SoapLab is a huge collection of bioinformatics APIs. Most of these APIs are based on EMBOSS bioinformatics software, and all of them are accessible via SOAP calls.

Many of the SoapLab APIs are involved with the alignment of biological sequences. Some of these APIs perform global or local sequence alignments, while others exist for editing alignments or sequences. Additional APIs provide a variety of methods for displaying biological sequences. Still more focus on sequence fragment assembly.

SoapLab provides some APIs specifically for use with nucleic RNA. Some determine its structure, composition, and folding. Others identify codons, CPG islands, and other motifs. Certain APIs are specifically designed to find primers, repeats, transcription factors, or restriction sites. Others take a nucleic RNA sequence and either mutate, translate, or profile it.

Still more APIs exist for phylogenetic work. These may perform phylogeny consensus analyses, calculate gene frequencies, or determine the phylogenies for molecular sequences. Additional services are designed to work with either continuous and discrete characters. Others can create distance matrices or draw phylogenetic trees.

Protein-specific APIs are also provided. Some of these allow users to predict the 2D and 3D structures of proteins. Others examine protein composition or profile proteins. Several more APIs detect protein motifs. A couple even allow users to mutate proteins.

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SoapLab: Highlights

Summary
Huge collection of bioinformatics services
Category
Science
Tags
Protocols
SOAP
Data Formats
XML
API home
http://www.ebi.ac.uk/soaplab/ 

SoapLab: Specifications

Functionality

Client Install Required
 
Service Endpoint
http://soaplab.org/
WSDL
http://www.ebi.ac.uk/soaplab/typed/services/a ...

Signup and Licensing

Signup Requirements
 
Developer Key Required
 
Account Required
 
Commercial Licensing
 
Provider
www.ebi.ac.uk/  
Managed By
European Bioinformatics Institute  
Non-Commercial Lic.
 
Data Licensing
 
Usage Fees
 
Program Fees
 
Certification Program
 
Usage Limits
 
Terms of Service
 

Security

Authentication Model
 
SSL Support
 
Read-only Without Login
 

Support

Vendor API Kits
 
Community API Kits
 
API Blog
 
Site Blog
 
API Forum
 
Developer Support
 
Console URL
 

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Mashups, Developers & Source Code

There are no mashups, developers or code associated with this API yet.

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