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Stockholm University PRODIV-TMHMM API

PRODIV-TMHMM is a hidden Markov model (HMM)-based service that does topology predictions for transmembrane proteins. In phylogenetics, "topology" is the pattern of branching in a phylogenetic tree, which shows the evolutionary relationships among groups of organisms. PRODIV-TMHMM accepts input in the form of a text file containing an amino acid sequence in FASTA format. The service then returns three-state topology predictions for each residue of the sequence. For increased accuracy, users may supply evolutionary information for the protein in the form of an alignment.

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Stockholm University PRODIV-TMHMM: Highlights

Summary
Topology prediction service for transmembrane proteins
Category
Science
Tags
Protocols
SOAP
Data Formats
XML
API home
http://wsdl.sbc.su.se/wsdl/prodivtmhmm.wsdl 

Stockholm University PRODIV-TMHMM: Specifications

Functionality

Client Install Required
 
WSDL
http://wsdl.sbc.su.se/wsdl/prodivtmhmm.wsdl

Signup and Licensing

Signup Requirements
 
Developer Key Required
 
Account Required
 
Commercial Licensing
 
Provider
www.su.se/  
Managed By
Stockholms Universitet  
Non-Commercial Lic.
 
Data Licensing
 
Usage Fees
 
Program Fees
 
Certification Program
 
Usage Limits
 
Terms of Service
 

Security

Authentication Model
 
SSL Support
 
Read-only Without Login
 

Support

Vendor API Kits
 
Community API Kits
 
API Blog
 
Site Blog
 
API Forum
 
Developer Support
 
Console URL
 

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