| API | Description | Category | Date |
|---|---|---|---|
| Web API for Biology | Biological sequence search and analysis | Medical | 2008-07-19 |
| UniProt | Protein sequence and annotation services | Medical | 2008-07-20 |
| EBI | Bioinformatics research database | Medical | 2008-08-17 |
| PDBj | Protein data bank services | Medical | 2008-09-21 |
| cPath | Medical database lookup | Medical | 2005-09-04 |
| SeqHound | Bioinformatics research database | Medical | 2005-09-04 |
| Kegg | Bioinformatics data services | Medical | 2006-08-23 |
| bioNMF | Biomedical data analysis service | Medical | 2012-02-24 |
| RNAhybrid | RNA hybridization prediction service | Science | 2012-01-27 |
| pknotsRG | RNA secondary structure prediction service | Science | 2012-01-27 |
| Decomp | DNA mass decomposition problem solver | Science | 2012-02-06 |
| BioDOM | Bioinformatics data XML converter | Science | 2012-02-06 |
| Passta | Structure-based protein relationship identifier | Science | 2012-02-06 |
| Roci | Phylogenetic tree-building tool | Science | 2012-02-06 |
| Phylogenetic Footprinting | Phylogenetic footprinting service | Science | 2012-02-07 |
| DKFZ SoapDB | Genetics and protein sequence databases | Science | 2012-02-10 |
| ProThesaurus | Protein name thesaurus | Science | 2012-02-10 |
| EBI PRANK | Probabilistic multiple alignment service | Science | 2012-02-13 |
| EBI Phobius | Protein topology and signal peptide prediction service | Science | 2012-02-10 |
| EBI Kalign | Multiple sequence alignment service | Science | 2012-02-14 |
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