| API | Description | Category | Date |
|---|---|---|---|
| EMBOSS Needle | Global pairwise sequence alignment service | Science | 2012-02-21 |
| EMBOSS Stretcher | Global pairwise sequence alignment service | Science | 2012-02-21 |
| EMBOSS Water | Local pairwise sequence alignment service | Science | 2012-02-21 |
| Ensembl | Multi-species genomic information databases | Science | 2012-11-27 |
| FuncNet | Protein analysis service | Tools | 2009-04-22 |
| G-language GAE | Genome sequence analysis service | Science | 2012-03-29 |
| Genome Maps | Genome browser service | Science | 2012-06-29 |
| GenomeMatrix | Multi-species genome analysis service | Science | 2012-04-10 |
| gnTEAM Full Text | Text editing and bioinformatics data retrieval services | Tools | 2012-03-29 |
| Golm Metabalome Database | Metabolic molecule database | Science | 2012-03-01 |
| HMMER | Protein sequence search and alignment service | Science | 2012-03-27 |
| HUSAR Bioinformatics Lab | Suite of bioinformatics services | Science | 2012-03-01 |
| IBIVU | Suite of bioinformatics services | Science | 2012-11-07 |
| IDT Oligo Analyzer | Short DNA/RNA molecule analysis service | Science | 2013-02-18 |
| iRefIndex | Protein interaction databases | Science | 2012-02-28 |
| Kegg | Bioinformatics data services | Medical | 2006-08-23 |
| MetaLocGramN | Localization prediction service for Gram-negative proteins | Science | 2012-06-28 |
| ModeRNA | Comparative modeling of RNA 3D structures | Science | 2012-04-10 |
| Mutalyzer | Checks variant sequence nomenclature for correctness | Science | 2012-03-29 |
| MyGene.Info | Annotated gene information service | Science | 2012-03-26 |
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