| API | Description | Category | Date |
|---|---|---|---|
| SABIO-RK | Biochemical reaction database | Science | 2012-03-26 |
| semanticSBML | Biochemical model viewing and manipulation service | Science | 2012-03-29 |
| SeqHound | Bioinformatics research database | Medical | 2005-09-04 |
| SLiMFinder | Shared protein motif discovery service | Science | 2012-02-28 |
| SoapLab | Huge collection of bioinformatics services | Science | 2012-07-31 |
| Stockholm University Palign | Protein sequence alignment service | Science | 2013-02-01 |
| Stockholm University PRODIV-TMHMM | Topology prediction service for transmembrane proteins | Science | 2013-02-05 |
| STRING | Protein interaction database | Science | 2012-04-10 |
| TFmodeller | DNA-binding protein modeling service | Science | 2012-04-06 |
| TogoWS | Integrated bioinformatics database access | Science | 2012-04-06 |
| TOPCONS | Protein topology prediction service | Science | 2012-04-10 |
| TreeBASE | Phylogenetic tree database | Science | 2012-03-26 |
| UniProt | Protein sequence and annotation services | Medical | 2008-07-20 |
| Web API for Biology | Biological sequence search and analysis | Medical | 2008-07-19 |
| XSPAN | Cross-species anatomy network | Science | 2012-04-06 |
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