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EBI PSI-BLAST API

Position Specific Iterative BLAST (PSI-BLAST) constructs a position-specific scoring matrix (PSSM) profile for a protein sequence using a set of BLAST alignments. The PSSM is then used to search the database in subsequent iterations, allowing the detection of distant evolutionary relationships between protein sequences. The PSI-BLAST API is provided by the European Bioinformatics Institute via SOAP and REST protocols.

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EBI PSI-BLAST: Highlights

Summary
Database search for related protein sequences
Category
Science
Tags
Protocols
SOAP, REST
Data Formats
XML
API home
http://www.ebi.ac.uk/Tools/webservices/servic ... 

EBI PSI-BLAST: Specifications

Functionality

Client Install Required
No  
Service Endpoint
http://soap.jdispatcher.ebi.ac.uk
WSDL
http://www.ebi.ac.uk/Tools/services/soap/psib ...

Signup and Licensing

Signup Requirements
None  
Developer Key Required
No  
Account Required
No  
Commercial Licensing
 
Provider
www.ebi.ac.uk/  
Managed By
European Bioinformatics Institute  
Non-Commercial Lic.
 
Data Licensing
Unspecified  
Usage Fees
None  
Program Fees
 
Certification Program
 
Usage Limits
up to 25 calls at once; do not submit more until results and processing have completed 
Terms of Service
www.ebi.ac.uk/Information/termsofuse.html 

Security

Authentication Model
None 
SSL Support
 
Read-only Without Login
 

Support

Vendor API Kits
C#, Java, Perl 
Community API Kits
 
API Blog
 
Site Blog
 
API Forum
 
Developer Support
 
Console URL
www.ebi.ac.uk/Tools/sss/psiblast/ 

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